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博客园 - Life·Intelligence

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Signac处理bulk ATAC-seq数据
Life·Intelligence · 2024-11-08 · via 博客园 - Life·Intelligence

Diffbind可以处理bulk ATAC-seq数据,但一些motif的高级分析就要单独做。

恰好,Signac R包,为单细胞而设计,包含了很多内置的motif分析,比如motif综合活性,可以很方便的做一些下游分析,比如correlation。

代码:http://localhost:17449/lab/tree/projects/BAF_SOX9/diffbind/3.ATAC-Histone.ipynb