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博客园 - Life·Intelligence

SSHFS + VS Code 挂载集群代码目录(macOS)| 集群vibe coding OpenClaw 多 Channel 实战总结(Windows 环境) OpenClaw Windows 安装与 Debug 最终版教程(适用于 MiniPC i3-N305 / 无 GPU) miniconda转miniforge | conda | license LightDock | 蛋白质-多肽对接 | peptide-protein docking 蛋白结构预测 | alphafold | colabfold | docking 全栈生信 | PyMol使用教程 细胞通讯推断 | CCI | CellChat | CellphoneDB | iTALK | NicheNet ChromHMM教程 极简 | GRN | SCENIC | pySCENIC | 安装使用最新版scenicplus Linux下载zenodo数据 共定位 | colocalization 分析 | 表观因子 findOverlappingPeaks | peak取交集操作 根据基因名批量查询下载PDB蛋白结构数据库 R小技巧汇总 Signac处理bulk ATAC-seq数据 Differential motif enrichment | CentriMo | meme ATAC-seq | TOBIAS | footprint分析 TCGA+GTEx基因表达数据合并 | 多癌种表达分析 药物筛选 | drug screen
亚马逊云 | AWS S3 | 基本操作
Life·Intelligence · 2024-11-03 · via 博客园 - Life·Intelligence

大佬现在都是这么玩数据的:

https://github.com/dpeerlab/progressive-plasticity-crc-metastasis

The processed H5AD data for reproducing this analysis is hosted on AWS S3 at:

s3://dp-laba-data-public/progressive-plasticity-crc-metastasis

conda install conda-forge::awscli

aws s3 ls  --no-sign-request s3://dp-lab-data-public

aws s3 ls  --no-sign-request s3://dp-lab-data-public/progressive-plasticity-crc-metastasis

aws s3 cp  --no-sign-request s3://dp-lab-data-public/progressive-plasticity-crc-metastasis progressive-plasticity-crc-metastasis

数据还在pre的状态,无法下载。

aws s3 ls  --no-sign-request s3://sra-pub-run-odp/sra/ERR2935852/ERR2935852