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PAC Learning with Bandit Feedback: Sharp Sample Complexity in the Realizable Setting Algorithms with Polynomially-Improved Approximation Factors for the $2 \rightarrow q$ Norm, and Applications A computational phase transition for learning-to-sample from Ising models Covering vertices by sequential stars Fermi-Dirac machines as quantizations of neurons A Comprehensive Evaluation of Vertex Elimination Algorithms for Algorithmic Differentiation A Tight Bound on Localization of Electrical Flows Optimal Dimension-Free Sampling for Regularized Classification Reducing the Randomness in Partition Oracles for Bounded Degree Minor-Free Graphs Beyond the Half-Approximation: Fair and Efficient Online Class Matching Efficient Uniform Sampling of Surjections via their Profiles Tractable Maximization of Budgeted Phylogenetic Diversity on Networks Utilizing Node Scanwidth Fairness in Aggregation: Optimal Top-$k$ and Improved Full Ranking Learning-Augmented Online Scheduling with Parsimonious Preemption Entropy Equivalence Testing Lumberjack: Better Differentially Private Random Forests through Heavy Hitter Detection in Trees The Secretary Problem with a Stochastic Precursor Polynomial-Time Robust Multiclass Linear Classification under Gaussian Marginals Efficient Banzhaf-Based Data Valuation for $k$-Nearest Neighbors Classification Block-Sphere Vector Quantization An Approximation Algorithm for Graph Label Selection Iterative Chow Filtering for Learning with Distribution Shift Complexity of Non-Log-Concave Sampling in Fisher Information Stochastic Matching via Local Sparsification Finite Sample Bounds for Learning with Score Matching What is Learnable in Valiant's Theory of the Learnable? Provable Quantization with Randomized Hadamard Transform Min-Max Optimization Requires Exponentially Many Queries Fast and Compact Graph Cuts for the Boykov-Kolmogorov Algorithm A proximal gradient algorithm for composite log-concave sampling
An Almost Optimal Edit Distance Oracle
Panagiotis Charalampopoulos, Paweł Gawrychowski, Shay Mozes, Ore · 2021-03-05 · via cs.DS updates on arXiv.org

We consider the problem of preprocessing two strings $S$ and $T$, of lengths $m$ and $n$, respectively, in order to be able to efficiently answer the following queries: Given positions $i,j$ in $S$ and positions $a,b$ in $T$, return the optimal alignment of $S[i \mathinner{.\,.} j]$ and $T[a \mathinner{.\,.} b]$. Let $N=mn$. We present an oracle with preprocessing time $N^{1+o(1)}$ and space $N^{1+o(1)}$ that answers queries in $\log^{2+o(1)}N$ time. In other words, we show that we can query the alignment of every two substrings in almost the same time it takes to compute just the alignment of $S$ and $T$. Our oracle uses ideas from our distance oracle for planar graphs [STOC 2019] and exploits the special structure of the alignment graph. Conditioned on popular hardness conjectures, this result is optimal up to subpolynomial factors. Our results apply to both edit distance and longest common subsequence (LCS). The best previously known oracle with construction time and size $\mathcal{O}(N)$ has slow $Ω(\sqrt{N})$ query time [Sakai, TCS 2019], and the one with size $N^{1+o(1)}$ and query time $\log^{2+o(1)}N$ (using a planar graph distance oracle) has slow $Ω(N^{3/2})$ construction time [Long & Pettie, SODA 2021]. We improve both approaches by roughly a $\sqrt N$ factor.