惯性聚合 高效追踪和阅读你感兴趣的博客、新闻、科技资讯
阅读原文 在惯性聚合中打开

推荐订阅源

J
Java Code Geeks
博客园 - 聂微东
人人都是产品经理
人人都是产品经理
freeCodeCamp Programming Tutorials: Python, JavaScript, Git & More
博客园_首页
量子位
阮一峰的网络日志
阮一峰的网络日志
酷 壳 – CoolShell
酷 壳 – CoolShell
H
Hackread – Cybersecurity News, Data Breaches, AI and More
云风的 BLOG
云风的 BLOG
D
DataBreaches.Net
B
Blog
L
LangChain Blog
Apple Machine Learning Research
Apple Machine Learning Research
Vercel News
Vercel News
博客园 - 三生石上(FineUI控件)
爱范儿
爱范儿
Microsoft Azure Blog
Microsoft Azure Blog
IT之家
IT之家
aimingoo的专栏
aimingoo的专栏
B
Blog RSS Feed
H
Help Net Security
The Cloudflare Blog
U
Unit 42

cs.DS updates on arXiv.org

PAC Learning with Bandit Feedback: Sharp Sample Complexity in the Realizable Setting Algorithms with Polynomially-Improved Approximation Factors for the $2 \rightarrow q$ Norm, and Applications A computational phase transition for learning-to-sample from Ising models Covering vertices by sequential stars Fermi-Dirac machines as quantizations of neurons A Comprehensive Evaluation of Vertex Elimination Algorithms for Algorithmic Differentiation A Tight Bound on Localization of Electrical Flows Optimal Dimension-Free Sampling for Regularized Classification Reducing the Randomness in Partition Oracles for Bounded Degree Minor-Free Graphs Beyond the Half-Approximation: Fair and Efficient Online Class Matching Efficient Uniform Sampling of Surjections via their Profiles Tractable Maximization of Budgeted Phylogenetic Diversity on Networks Utilizing Node Scanwidth Fairness in Aggregation: Optimal Top-$k$ and Improved Full Ranking Learning-Augmented Online Scheduling with Parsimonious Preemption Entropy Equivalence Testing Lumberjack: Better Differentially Private Random Forests through Heavy Hitter Detection in Trees The Secretary Problem with a Stochastic Precursor Polynomial-Time Robust Multiclass Linear Classification under Gaussian Marginals Efficient Banzhaf-Based Data Valuation for $k$-Nearest Neighbors Classification Block-Sphere Vector Quantization An Approximation Algorithm for Graph Label Selection Iterative Chow Filtering for Learning with Distribution Shift Complexity of Non-Log-Concave Sampling in Fisher Information Stochastic Matching via Local Sparsification Finite Sample Bounds for Learning with Score Matching What is Learnable in Valiant's Theory of the Learnable? Provable Quantization with Randomized Hadamard Transform Min-Max Optimization Requires Exponentially Many Queries Fast and Compact Graph Cuts for the Boykov-Kolmogorov Algorithm A proximal gradient algorithm for composite log-concave sampling
Computing a Relevant Set of Nonbinary Maximum Acyclic Agr...
Benjamin Albrecht · 2015-12-18 · via cs.DS updates on arXiv.org

There exist several methods dealing with the reconstruction of rooted phylogenetic networks explaining different evolutionary histories given by rooted binary phylogenetic trees. In practice, however, due to insufficient information of the underlying data, phylogenetic trees are in general not completely resolved and, thus, those methods can often not be applied to biological data. In this work, we make a first important step to approach this goal by presenting the first algorithm --- called allMulMAAFs --- that enables the computation of all relevant nonbinary maximum acyclic agreement forests for two rooted (nonbinary) phylogenetic trees on the same set of taxa. Notice that our algorithm is part of the freely available software Hybroscale computing minimum hybridization networks for a set of rooted (nonbinary) phylogenetic trees on an overlapping set of taxa.