We focus on a binary classification problem in an edge intelligence system where false negatives are more costly than false positives. The system has a compact, locally deployed model, which is supplemented by a larger, remote model, which is accessible via the network by incurring an offloading cost. For each sample, our system first uses the locally deployed model for inference. Based on the output of the local model, the sample may be offloaded to the remote model. This work aims to understand the fundamental trade-off between classification accuracy and the offloading costs within such a hierarchical inference (HI) system. To optimise this system, we propose an online learning framework that continuously adapts a pair of thresholds on the local model's confidence scores. These thresholds determine the prediction of the local model and whether a sample is classified locally or offloaded to the remote model. We present a closed-form solution for the setting where the local model is calibrated. For the more general case of uncalibrated models, we introduce H2T2, an online two-threshold hierarchical inference policy, and prove it achieves sublinear regret. H2T2 is model-agnostic, requires no training, and learns during the inference phase using limited feedback. Simulations on real-world datasets show that H2T2 consistently outperforms naive and single-threshold HI policies, sometimes even surpassing offline optima. The policy also demonstrates robustness to distribution shifts and adapts effectively to mismatched classifiers.