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Windows can use normal TLS certificates to authenticate RDP sessions. This gets rid of the annoying RDP certificate warnings:

Using real, signed certificates for RDP offers a way to enhance security (preventing man-in-the-middle attacks) and reduce alert fatigue.
Read through the following help pages:
tl;dr:
# Install the OpenSSH Client
Add-WindowsCapability -Online -Name OpenSSH.Client~~~~0.0.1.0
# Install the OpenSSH Server
Add-WindowsCapability -Online -Name OpenSSH.Server~~~~0.0.1.0
# Confirm the Firewall rule is configured. It should be created automatically by setup. Run the following to verify
if (!(Get-NetFirewallRule -Name "OpenSSH-Server-In-TCP" -ErrorAction SilentlyContinue | Select-Object Name, Enabled)) {
Write-Output "Firewall Rule 'OpenSSH-Server-In-TCP' does not exist, creating it..."
New-NetFirewallRule -Name 'OpenSSH-Server-In-TCP' -DisplayName 'OpenSSH Server (sshd)' -Enabled True -Direction Inbound -Protocol TCP -Action Allow -LocalPort 22
} else {
Write-Output "Firewall rule 'OpenSSH-Server-In-TCP' has been created and exists."
}
Open C:\ProgramData\ssh\sshd_config with a text editor running as Administrator (Notepad++ works well) and disable password logins.
Find the following line:
#PasswordAuthentication yes
and change it to:
PasswordAuthentication no
Create C:\ProgramData\ssh\administrators_authorized_keys and put the SSH public key of the deploy box into the file.
Open a shell with administrator/elevated permissions and run:
icacls.exe "C:\ProgramData\ssh\administrators_authorized_keys" /inheritance:r /grant "Administrators:F" /grant "SYSTEM:F"
to set the permissions of the authorized_keys file to be only accessible by SYSTEM and the administrative group.
Then start and enable the sshd service:
# Start the sshd service
Start-Service sshd
# Autostart sshd
Set-Service -Name sshd -StartupType 'Automatic'
Try to log onto the windows machine from your deploy box:
ssh myuser@windowsbox.example.com
Acknowledge the fingerprint warning and check if you get dropped into a cmd.exe shell.
On our deploy box, we’ll create a PowerShell script called certimport.ps1. Change example.com to the CN of your certificate. The certificate can have more hosts in the SAN fields, but the CN is used for managing/cleanup of old certificates.
$domain = "example.com"
# Import pkcs.pfx into the local key store
$pfxfile = "pkcs.pfx"
$CertificatePassword = ""
$certRootStore = "LocalMachine"
$certStore = "My"
$pfx = New-Object System.Security.Cryptography.X509Certificates.X509Certificate2
$pfx.Import($pfxfile,$CertificatePassword,"Exportable,PersistKeySet,MachineKeySet")
$store = New-Object System.Security.Cryptography.X509Certificates.X509Store($certStore,$certRootStore)
$store.Open('ReadWrite')
$store.Add($pfx)
$store.Close()
$certThumbprint = $pfx.Thumbprint
# Set RDP certificate thumbprint to the new certificate
wmic /namespace:\\root\cimv2\TerminalServices PATH Win32_TSGeneralSetting Set SSLCertificateSHA1Hash="$certThumbprint"
Write-Output $pfx.Thumbprint
# Remove all old certificates from LetsEncrypt, for this domain and not using the new thumbprint
$date = Get-Date
$store = New-Object System.Security.Cryptography.X509Certificates.X509Store($certStore,$certRootStore)
$store.Open('ReadWrite')
foreach($cert in $store.Certificates) {
if($cert.Subject -eq "CN=$domain" -And $cert.Issuer.Contains("Let's Encrypt") -And $cert.Thumbprint -ne $certThumbprint) {
Write-Log "Removing certificate $($cert.Thumbprint)"
$store.Remove($cert)
}
}
$store.Close()
To upload the certificate to the windows box, run the following commands (manually or in your renew script):
openssl pkcs12 -passout pass: -keypbe NONE -certpbe NONE -nodes -export -out pkcs.pfx -in /home/acme/.acme.sh/example.com/fullchain.cer -inkey /home/acme/.acme.sh/example.com/example.com.key
scp certimport.ps1 myuser@windowsbox.example.com:
scp pkcs.pfx myuser@windowsbox.example.com:
ssh myuser@windowsbox.example.com "powershell ~/certimport.ps1 && del certimport.ps1 && del pkcs.pfx"
OpenSSL takes the full certificate chain (certificate + intermediate certs) and the private key and converts them into a PKCS12/PFX file.
SCP/SFTP is used to copy both the certimport.ps1 script and the pkcs.pfx certificate to the Windows machine.
The final SSH command then:

You can run certlm.msc to check the imported certificates:

At the bottom of the “details” tab, the SHA1 fingerprint is shown:

You can check the currently configured RDP fingerprint by running:
wmic /namespace:\\root\cimv2\TerminalServices PATH Win32_TSGeneralSetting Get SSLCertificateSHA1Hash

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