Given a permutation $f$, we study the positroid Catalan number $C_f$ defined to be the torus-equivariant Euler characteristic of the associated open positroid variety. We introduce a class of repetition-free permutations and show that the corresponding positroid Catalan numbers count Dyck paths avoiding a convex subset of the rectangle. We show that any convex subset appears in this way. Conjecturally, the associated $q,t$-polynomials coincide with the generalized $q,t$-Catalan numbers that recently appeared in relation to the shuffle conjecture, flag Hilbert schemes, and Khovanov-Rozansky homology of Coxeter links.