Deformable continuum robots (DCRs) present unique planning challenges due to nonlinear deformation mechanics and partial state observability, violating the Markov assumptions of conventional reinforcement learning (RL) methods. While Jacobian-based approaches offer theoretical foundations for rigid manipulators, their direct application to DCRs remains limited by time-varying kinematics and underactuated deformation dynamics. This paper proposes Jacobian Exploratory Dual-Phase RL (JEDP-RL), a framework that decomposes planning into phased Jacobian estimation and policy execution. During each training step, we first perform small-scale local exploratory actions to estimate the deformation Jacobian matrix, then augment the state representation with Jacobian features to restore approximate Markovianity. Extensive SOFA surgical dynamic simulations demonstrate JEDP-RL's three key advantages over proximal policy optimization (PPO) baselines: 1) Convergence speed: 3.2x faster policy convergence, 2) Navigation efficiency: requires 25% fewer steps to reach the target, and 3) Generalization ability: achieve 92% success rate under material property variations and achieve 83% (33% higher than PPO) success rate in the unseen tissue environment.