Modern Transformer-based models frequently suffer from miscalibration, producing overconfident predictions that do not reflect true empirical frequencies. This work investigates the calibration dynamics of LoRA: Low-Rank Adaptation and a novel hyper-network-based adaptation framework as parameter-efficient alternatives to full fine-tuning for RoBERTa. Evaluating across the GLUE benchmark, we demonstrate that LoRA-based adaptation consistently achieves calibration parity with (and in specific tasks exceeds) full fine-tuning, while maintaining significantly higher parameter efficiency. We further explore a dynamic approach where a shared hyper-network generates LoRA factors (A and B matrices) to induce structural coupling across layers. This approach produced results similar to standard LoRA fine-tuning, even achieving better MCC on CoLA dataset. Our study also reveal a critical trade-off: constraining the adaptation space (e.g., freezing matrices A) acts as a powerful regularizer that enhances Expected Calibration Error (ECE), but necessitates a carefully balanced sacrifice in downstream task accuracy. To support future research, we provide a unified and reproducible implementation of contemporary calibration metrics, including ECE, MCE, and ACE. Our findings clarify the relationship between parameter efficiency and probabilistic reliability, positioning structured low-rank updates as a viable foundation for uncertainty-aware Transformer architectures. Code available at: https://github.com/btrojan-official/HypeLoRA