惯性聚合 高效追踪和阅读你感兴趣的博客、新闻、科技资讯
阅读原文 在惯性聚合中打开

推荐订阅源

freeCodeCamp Programming Tutorials: Python, JavaScript, Git & More
爱范儿
爱范儿
WordPress大学
WordPress大学
博客园 - 三生石上(FineUI控件)
J
Java Code Geeks
Vercel News
Vercel News
aimingoo的专栏
aimingoo的专栏
T
Tailwind CSS Blog
罗磊的独立博客
B
Blog
博客园_首页
A
About on SuperTechFans
有赞技术团队
有赞技术团队
V
V2EX
U
Unit 42
I
InfoQ
IT之家
IT之家
博客园 - 司徒正美
阮一峰的网络日志
阮一峰的网络日志
博客园 - 叶小钗
Cyber Security Advisories - MS-ISAC
Cyber Security Advisories - MS-ISAC
Stack Overflow Blog
Stack Overflow Blog
The Cloudflare Blog
H
Help Net Security

cs.DS updates on arXiv.org

PAC Learning with Bandit Feedback: Sharp Sample Complexity in the Realizable Setting Algorithms with Polynomially-Improved Approximation Factors for the $2 \rightarrow q$ Norm, and Applications A computational phase transition for learning-to-sample from Ising models Covering vertices by sequential stars Fermi-Dirac machines as quantizations of neurons A Comprehensive Evaluation of Vertex Elimination Algorithms for Algorithmic Differentiation A Tight Bound on Localization of Electrical Flows Optimal Dimension-Free Sampling for Regularized Classification Reducing the Randomness in Partition Oracles for Bounded Degree Minor-Free Graphs Beyond the Half-Approximation: Fair and Efficient Online Class Matching Efficient Uniform Sampling of Surjections via their Profiles Tractable Maximization of Budgeted Phylogenetic Diversity on Networks Utilizing Node Scanwidth Fairness in Aggregation: Optimal Top-$k$ and Improved Full Ranking Learning-Augmented Online Scheduling with Parsimonious Preemption Entropy Equivalence Testing Lumberjack: Better Differentially Private Random Forests through Heavy Hitter Detection in Trees The Secretary Problem with a Stochastic Precursor Polynomial-Time Robust Multiclass Linear Classification under Gaussian Marginals Efficient Banzhaf-Based Data Valuation for $k$-Nearest Neighbors Classification Block-Sphere Vector Quantization An Approximation Algorithm for Graph Label Selection Iterative Chow Filtering for Learning with Distribution Shift Complexity of Non-Log-Concave Sampling in Fisher Information Stochastic Matching via Local Sparsification Finite Sample Bounds for Learning with Score Matching What is Learnable in Valiant's Theory of the Learnable? Provable Quantization with Randomized Hadamard Transform Min-Max Optimization Requires Exponentially Many Queries Fast and Compact Graph Cuts for the Boykov-Kolmogorov Algorithm A proximal gradient algorithm for composite log-concave sampling
Biochemical network decomposition reveals absolute concen...
Jost Neigenfind, Sergio Grimbs, Zoran Nikoloski · 2011-05-04 · via cs.DS updates on arXiv.org

Robustness of biochemical systems has become one of the central questions in Systems Biology, although it is notoriously difficult to formally capture its multifaceted nature. Maintenance of normal system function depends not only on the stoichiometry of the underlying interrelated components, but also on a multitude of kinetic parameters. For given parameter values, recent findings have aimed at characterizing the property of the system components to exhibit same concentrations in the resulting steady states, termed absolute concentration robustness (ACR). However, the existing method for determining system components exhibiting ACR is applicable only to one class of mass-action networks for which this property can be confirmed, but not discarded. Here we design a new method which relies on biochemical network decompositions into subnetworks, called elementary flux modes, to identify ACR in a broader class of mass-action networks by using only the given stoichiometry. This approach reduces the problem of determining ACR to that of solving parameterized systems of linear equations, rendering it amenable to networks of larger sizes. Our unified framework will be helpful in analyzing this biologically important type of robustness as well as detection of novel systemic properties independent of the kinetic parameters for more complex biochemical networks.