Intersection graphs are well-studied in the area of graph algorithms. Some intersection graph classes are known to have algorithms enumerating all unlabeled graphs by reverse search. Since these algorithms output graphs one by one and the numbers of graphs in these classes are vast, they work only for a small number of vertices. Binary decision diagrams (BDDs) are compact data structures for various types of data and useful for solving optimization and enumeration problems. This study proposes enumeration algorithms for five intersection graph classes, which admit $\mathrm{O}(n)$-bit string representations for their member graphs. Our algorithm for each class enumerates all unlabeled graphs with $n$ vertices over BDDs representing the binary strings in time polynomial in $n$. Moreover, our algorithms are extended to enumerate those with constraints on the maximum (bi)clique size and/or the number of edges.