Designing coresets--small-space sketches of the data preserving cost of the solutions within $(1\pm ε)$-approximate factor--is an important research direction in the study of center-based $k$-clustering problems, such as $k$-means or $k$-median. Feldman and Langberg [STOC'11] have shown that for $k$-clustering of $n$ points in general metrics, it is possible to obtain coresets whose size depends logarithmically in $n$. Moreover, such a dependency in $n$ is inevitable in general metrics. A significant amount of recent work in the area is devoted to obtaining coresests whose sizes are independent of $n$ (i.e., ``small'' coresets) for special metrics, like $d$-dimensional Euclidean spaces, doubling metrics, metrics of graphs of bounded treewidth, or those excluding a fixed minor. In this paper, we provide the first constructions of small coresets for $k$-clustering in the metrics induced by geometric intersection graphs, such as Euclidean-weighted Unit Disk/Square Graphs. These constructions follow from a general theorem that identifies two canonical properties of a graph metric sufficient for obtaining small coresets. The proof of our theorem builds on the recent work of Cohen-Addad, Saulpic, and Schwiegelshohn [STOC '21], which ensures small-sized coresets conditioned on the existence of an interesting set of centers, called ``centroid set''. The main technical contribution of our work is the proof of the existence of such a small-sized centroid set for graphs that satisfy the two canonical geometric properties. The new coreset construction helps to design the first $(1+ε)$-approximation for center-based clustering problems in UDGs and USGs, that is fixed-parameter tractable in $k$ and $ε$ (FPT-AS).