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cs.DS updates on arXiv.org

PAC Learning with Bandit Feedback: Sharp Sample Complexity in the Realizable Setting Algorithms with Polynomially-Improved Approximation Factors for the $2 \rightarrow q$ Norm, and Applications A computational phase transition for learning-to-sample from Ising models Covering vertices by sequential stars Fermi-Dirac machines as quantizations of neurons A Comprehensive Evaluation of Vertex Elimination Algorithms for Algorithmic Differentiation A Tight Bound on Localization of Electrical Flows Optimal Dimension-Free Sampling for Regularized Classification Reducing the Randomness in Partition Oracles for Bounded Degree Minor-Free Graphs Beyond the Half-Approximation: Fair and Efficient Online Class Matching Efficient Uniform Sampling of Surjections via their Profiles Tractable Maximization of Budgeted Phylogenetic Diversity on Networks Utilizing Node Scanwidth Fairness in Aggregation: Optimal Top-$k$ and Improved Full Ranking Learning-Augmented Online Scheduling with Parsimonious Preemption Entropy Equivalence Testing Lumberjack: Better Differentially Private Random Forests through Heavy Hitter Detection in Trees The Secretary Problem with a Stochastic Precursor Polynomial-Time Robust Multiclass Linear Classification under Gaussian Marginals Efficient Banzhaf-Based Data Valuation for $k$-Nearest Neighbors Classification Block-Sphere Vector Quantization An Approximation Algorithm for Graph Label Selection Iterative Chow Filtering for Learning with Distribution Shift Complexity of Non-Log-Concave Sampling in Fisher Information Stochastic Matching via Local Sparsification Finite Sample Bounds for Learning with Score Matching What is Learnable in Valiant's Theory of the Learnable? Provable Quantization with Randomized Hadamard Transform Min-Max Optimization Requires Exponentially Many Queries Fast and Compact Graph Cuts for the Boykov-Kolmogorov Algorithm A proximal gradient algorithm for composite log-concave sampling
Improved Approximation Guarantees for Shortest Superstrin...
Matthias Englert, Nicolaos Matsakis, Pavel Veselý · 2021-11-07 · via cs.DS updates on arXiv.org

In the Shortest Superstring problem, we are given a set of strings and we are asking for a common superstring, which has the minimum number of characters. The Shortest Superstring problem is NP-hard and several constant-factor approximation algorithms are known for it. Of particular interest is the GREEDY algorithm, which repeatedly merges two strings of maximum overlap until a single string remains. The GREEDY algorithm, being simpler than other well-performing approximation algorithms for this problem, has attracted attention since the 1980s and is commonly used in practical applications. Tarhio and Ukkonen (TCS 1988) conjectured that GREEDY gives a 2-approximation. In a seminal work, Blum, Jiang, Li, Tromp, and Yannakakis (STOC 1991) proved that the superstring computed by GREEDY is a 4-approximation, and this upper bound was improved to 3.5 by Kaplan and Shafrir (IPL 2005). We show that the approximation guarantee of GREEDY is at most $(13+\sqrt{57})/6 \approx 3.425$, making the first progress on this question since 2005. Furthermore, we prove that the Shortest Superstring can be approximated within a factor of $(37+\sqrt{57})/18\approx 2.475$, improving slightly upon the currently best $2\frac{11}{23}$-approximation algorithm by Mucha (SODA 2013).