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cs.DS updates on arXiv.org

PAC Learning with Bandit Feedback: Sharp Sample Complexity in the Realizable Setting Algorithms with Polynomially-Improved Approximation Factors for the $2 \rightarrow q$ Norm, and Applications A computational phase transition for learning-to-sample from Ising models Covering vertices by sequential stars Fermi-Dirac machines as quantizations of neurons A Comprehensive Evaluation of Vertex Elimination Algorithms for Algorithmic Differentiation A Tight Bound on Localization of Electrical Flows Optimal Dimension-Free Sampling for Regularized Classification Reducing the Randomness in Partition Oracles for Bounded Degree Minor-Free Graphs Beyond the Half-Approximation: Fair and Efficient Online Class Matching Efficient Uniform Sampling of Surjections via their Profiles Tractable Maximization of Budgeted Phylogenetic Diversity on Networks Utilizing Node Scanwidth Fairness in Aggregation: Optimal Top-$k$ and Improved Full Ranking Learning-Augmented Online Scheduling with Parsimonious Preemption Entropy Equivalence Testing Lumberjack: Better Differentially Private Random Forests through Heavy Hitter Detection in Trees The Secretary Problem with a Stochastic Precursor Polynomial-Time Robust Multiclass Linear Classification under Gaussian Marginals Efficient Banzhaf-Based Data Valuation for $k$-Nearest Neighbors Classification Block-Sphere Vector Quantization An Approximation Algorithm for Graph Label Selection Iterative Chow Filtering for Learning with Distribution Shift Complexity of Non-Log-Concave Sampling in Fisher Information Stochastic Matching via Local Sparsification Finite Sample Bounds for Learning with Score Matching What is Learnable in Valiant's Theory of the Learnable? Provable Quantization with Randomized Hadamard Transform Min-Max Optimization Requires Exponentially Many Queries Fast and Compact Graph Cuts for the Boykov-Kolmogorov Algorithm A proximal gradient algorithm for composite log-concave sampling
Improved space-time tradeoffs for approximate full-text i...
Djamal Belazzougui · 2011-03-11 · via cs.DS updates on arXiv.org

In this paper we are interested in indexing texts for substring matching queries with one edit error. That is, given a text $T$ of $n$ characters over an alphabet of size $σ$, we are asked to build a data structure that answers the following query: find all the $occ$ substrings of the text that are at edit distance at most $1$ from a given string $q$ of length $m$. In this paper we show two new results for this problem. The first result, suitable for an unbounded alphabet, uses $O(n\log^εn)$ (where $ε$ is any constant such that $0<ε<1$) words of space and answers to queries in time $O(m+occ)$. This improves simultaneously in space and time over the result of Cole et al. The second result, suitable only for a constant alphabet, relies on compressed text indices and comes in two variants: the first variant uses $O(n\log^ε n)$ bits of space and answers to queries in time $O(m+occ)$, while the second variant uses $O(n\log\log n)$ bits of space and answers to queries in time $O((m+occ)\log\log n)$. This second result improves on the previously best results for constant alphabets achieved in Lam et al. (Algorithmica 2008) and Chan et al. (Algorithmica 2010).