The rapid advancement of artificial intelligence (AI) has demonstrated substantial potential in chemical engineering, yet existing AI systems remain limited in interdisciplinary collaboration and exploration of uncharted problems. To address these issues, we present the Cyber Academia-Chemical Engineering (CA-ChemE) system, a living digital town that enables self-directed research evolution and emergent scientific discovery through multi-agent collaboration. By integrating domain-specific knowledge bases, knowledge enhancement technologies, and collaboration agents, the system successfully constructs an intelligent ecosystem capable of deep professional reasoning and efficient interdisciplinary collaboration. Our findings demonstrate that knowledge base-enabled enhancement mechanisms improved dialogue quality scores by 10-15% on average across all seven expert agents, fundamentally ensuring technical judgments are grounded in verifiable scientific evidence. However, we observed a critical bottleneck in cross-domain collaboration efficiency, prompting the introduction of a Collaboration Agent (CA) equipped with ontology engineering capabilities. CA's intervention achieved 8.5% improvements for distant-domain expert pairs compared to only 0.8% for domain-proximate pairs - a 10.6-fold difference - unveiling the "diminished collaborative efficiency caused by knowledge-base gaps" effect. This study demonstrates how carefully designed multi-agent architectures can provide a viable pathway toward autonomous scientific discovery in chemical engineering.