Large language models (LLMs) work by manipulating the geometry of input embedding vectors over multiple layers. Here, we ask: how are the input vocabulary representations of language models structured, and how and when does this structure evolve over training? To answer this question, we use representational similarity analysis, running a suite of experiments that correlate the geometric structure of the input embeddings and output embeddings of two open-source models (Pythia 12B and OLMo 7B) with semantic, syntactic, and frequency-based metrics over the course of training. Our key findings are as follows: 1) During training, the vocabulary embedding geometry quickly converges to high correlations with a suite of semantic and syntactic features; 2) Embeddings of high-frequency and function words (e.g., "the," "of") converge to their final vectors faster than lexical and low-frequency words, which retain some alignment with the bias in their random initializations. These findings help map the dynamic trajectory by which input embeddings organize around linguistic structure, revealing distinct roles for word frequency and function. Our findings motivate a deeper study of how the evolution of vocabulary geometry may facilitate specific capability gains during model training.