The Graovac-Pisanski index, also called the modified Wiener index, was introduced in 1991 and represents an extension of the original Wiener index, because it considers beside the distances in a graph also its symmetries. Similarly as Wiener in 1947 showed the correlation of the Wiener indices of the alkane series with the boiling points, in 2018 the connection between the Graovac-Pisanski index and the melting points of some hydrocarbon molecules was established. In this paper, we prove that the Graovac-Pisanski index of any connected bipartite graph as well as of any connected graph on an even number of vertices is an integer number. These results are applied to some important families of hydrocarbon molecules. By using a computer programme, the graphs with a non-integer Graovac-Pisanski index on at most nine vertices are counted. Finally, an infinite class of unicyclic graphs with a non-integer Graovac-Pisanski index is described.