Occlusion remains a critical challenge in robotic fruit harvesting, as undetected or inaccurately localised fruits often results in substantial crop losses. To mitigate this issue, we propose a harvesting framework using a new amodal segmentation model, GDA-YOLO11, which incorporates architectural improvements and an updated asymmetric mask loss. The proposed model is trained on a modified version of a public citrus dataset and evaluated on both the base dataset and occlusion-sensitive subsets with varying occlusion levels. Within the framework, full fruit masks, including invisible regions, are inferred by GDA-YOLO11, and picking points are subsequently estimated using the Euclidean distance transform. These points are then projected into 3D coordinates for robotic harvesting execution. Experiments were conducted using real citrus fruits in a controlled environment simulating occlusion scenarios. Notably, to the best of our knowledge, this study provides the first practical demonstration of amodal instance segmentation in robotic fruit harvesting. GDA-YOLO11 achieves a precision of 0.844, recall of 0.846, mAP@50 of 0.914, and mAP@50:95 of 0.636, outperforming YOLO11n by 5.1%, 1.3%, and 1.0% in precision, mAP@50, and mAP@50:95, respectively. The framework attains harvesting success rates of 92.59%, 85.18%, 48.14%, and 22.22% at zero to high occlusion levels, improving success by 3.5% under medium and high occlusion. These findings demonstrate that GDA-YOLO11 enhances occlusion robust segmentation and streamlines perception-to-action integration, paving the way for more reliable autonomous systems in agriculture.