We introduce a technique for estimating a structured covariance matrix from observations of a random vector which have been sketched. Each observed random vector $\boldsymbol{x}_t$ is reduced to a single number by taking its inner product against one of a number of pre-selected vector $\boldsymbol{a}_\ell$. These observations are used to form estimates of linear observations of the covariance matrix $\boldsymbol{\varSigma}$, which is assumed to be simultaneously sparse and low-rank. We show that if the sketching vectors $\boldsymbol{a}_\ell$ have a special structure, then we can use straightforward two-stage algorithm that exploits this structure. We show that the estimate is accurate when the number of sketches is proportional to the maximum of the rank times the number of significant rows/columns of $\boldsymbol{\varSigma}$. Moreover, our algorithm takes direct advantage of the low-rank structure of $\boldsymbol{\varSigma}$ by only manipulating matrices that are far smaller than the original covariance matrix.