In this article, we consider a novel version of three-dimensional (3D) globally modified Navier-Stokes (GMNS) system introduced by [Caraballo et. al., Adv. Nonlinear Stud. (2006), 6:411-436], which is very significant from the perspective of deterministic as well as stochastic partial differential equations. Our focus is on examining a stochastic version of the suggested 3D GMNS equations that are perturbed by an infinite-dimensional additive noise. We can consider a rough additive noise (Lebesgue space valued) with this model, which is not appropriate to consider with the system presented in [Caraballo et. al., Adv. Nonlinear Stud. (2006), 6:411-436]. One of the technical problems associated with the rough noise is overcome by the use of the corresponding Cameron-Martin (or reproducing kernel Hilbert) space. This article aims to accomplish three objectives. Firstly, we establish the existence and uniqueness of weak solutions (in the analytic sense) of the underlying stochastic system using a Doss-Sussman transformation and a primary ingredient Minty-Browder technique. Secondly, we demonstrate the existence of random attractors for the underlying stochastic system in the natural space of square integrable divergence-free functions. Finally, we show the existence of an invariant measure for the underlying stochastic system for any viscosity coefficient $ ν> 0 $ and uniqueness of invariant measure for sufficiently large $ν$ by using the exponential stability of solutions. A validation of the proposed version of 3D GMNS equations has also been discussed in the appendix by establishing that the sequence of weak solutions of 3D GMNS equations converges to a weak solution of 3D Navier-Stokes equations as the modification parameter goes to infinity.