We solve the Skorokhod embedding problem for a class of stochastic processes satisfying an inhomogeneous stochastic differential equation (SDE) of the form $d A_t =μ(t, A_t) d t + σ(t, A_t) d W_t$. We provide sufficient conditions guaranteeing that for a given probability measure $ν$ on $\mathbb{R}$ there exists a bounded stopping time $τ$ and a real $a$ such that the solution $(A_t)$ of the SDE with initial value $a$ satisfies $A_τ\sim ν$. We hereby distinguish the cases where $(A_t)$ is a solution of the SDE in a weak or strong sense. Our construction of embedding stopping times is based on a solution of a fully coupled forward-backward SDE. We use the so-called method of decoupling fields for verifying that the FBSDE has a unique solution. Finally, we sketch an algorithm for putting our theoretical construction into practice and illustrate it with a numerical experiment.