We study the volume of the critical clusters for the percolation of the level sets of the Gaussian free field on metric graphs. On $\mathbb{Z}^d$ below the upper-critical dimension $d=6$, we show that the largest such cluster in a box of side length $r$ has volume of order $r^{\frac{d+2}{2}}$, as conjectured by Werner in arXiv:2002.11487. This is in contrast to the mean-field regime $d>6$, where this volume is of order $r^4$. We further obtain precise asymptotic tails for the volume of the critical cluster of the origin, and a lower bound on the tail of the volume of the near-critical cluster of the origin below the upper-critical dimension. Our proof extends to any graph with polynomial volume growth and polynomial decay of the Green's function as long as the critical one-arm probability decays as the square root of the Green's function, which is satisfied in low enough dimension.