In this paper we consider a dynamic Erdős-Rényi random graph with independent identically distributed edge processes. Our aim is to describe the joint evolution of the entries of a subgraph count vector. The main result of this paper is a functional central limit theorem: we establish, under an appropriate centering and scaling, the joint functional convergence of the vector of subgraph counts to a specific multidimensional Gaussian process. The result holds under mild assumptions on the edge processes, most notably a Lipschitz-type condition.