




















In biology, stochastic branching processes with a two-stage, hierarchical structure arise in the study of population dynamics, gene expression, and phylogenetic inference. These models have been commonly analyzed using generating functions, the method of characteristics and various perturbative approximations. Here we describe a general method for analyzing hierarchic first-order reaction networks using Lie theory. Crucially, we identify the fact that the Lie group associated to hierarchic reaction networks decomposes as a wreath product of the groups associated to the subnetworks of the independent and dependent types. After explaining the general method, we illustrate it on a model of population dynamics and the so-called two-state or telegraph model of single-gene transcription. Solutions to such processes provide essential input to downstream methods designed to attempt to infer parameters of these and related models.
此内容由惯性聚合(RSS阅读器)自动聚合整理,仅供阅读参考。 原文来自 — 版权归原作者所有。