Let $G$ be a permutation group on a set $Ω$. A subset of $Ω$ is a base for $G$ if its pointwise stabilizer in $G$ is trivial. By $b(G)$ we denote the size of the smallest base of $G$. Every permutation group with $b(G)=2$ contains some regular suborbits. It is conjectured by Burness-Giudici in [4] that every primitive permutation group $G$ with $b(G)=2$ has the property that if $α^g\not\in Γ$ then $Γ\cap Γ^g\neq \emptyset$, where $Γ$ is the union of all regular suborbits of $G$ relative to $α$. An affirmative answer of the conjecture has been shown for many sporadic simple groups and some alternative groups in [4], but it is still open for simple groups of Lie-type. The first candidate of infinite family of simple groups of Lie-type we should work on might be $PSL(2,q)$, where $q\geq 5$. In this manuscript, we show the correctness of the conjecture for all the primitive groups with socle $PSL(2,q)$, see Theorem $1.3$.