We study the expressive power of first-order logic with counting quantifiers, especially the $k$-variable and quantifier-rank-$q$ fragment, using homomorphism indistinguishability. Recently, Dawar, Jakl, and Reggio~(2021) proved that two graphs satisfy the same $k$-variable and quantifier-rank-$q$ sentences if and only if they are homomorphism indistinguishable over the class of graphs admitting a $k$-pebble forest cover of depth $q$. After reproving this result using elementary means, we provide a graph-theoretic analysis of this graph class. This allows us to separate it from the intersection of the class of all graphs of treewidth at most $k-1$ and the class of all graphs of treedepth at most $q$, provided that $q$ is sufficiently larger than $k$. We are able to lift this separation to a (semantic) separation of the respective homomorphism indistinguishability relations. We do this by showing that the graph classes of all graphs of treedepth at most $q$ and of graphs admitting a $k$-pebble forest cover of depth $q$ are homomorphism distinguishing closed, as conjectured by Roberson~(2022). In order to prove Roberson's conjecture for the class of graphs admitting a $k$-pebble forest cover of depth $q$ we characterise the class in terms of a monotone Cops-and-Robber game.The crux is to prove that if Cop has a winning strategy then Cop also has a winning strategy that is monotone.To that end, we show how to transform Cop's winning strategy into a pre-tree-decomposition, which is inspired by decompositions of matroids, and then applying an intricate breadth-first `cleaning up' procedure along the pre-tree-decomposition (which may temporarily lose the property of representing a strategy), in order to achieve monotonicity while controlling the number of rounds simultaneously across all branches of the decomposition via a vertex exchange argument.