We show that the number of lattice points in the boundary of a positive integer dilate of a Delzant integral polytope is a polynomial in the dilation parameter, analogous to the Ehrhart polynomial giving the number of lattice points in a lattice polytope. We give an explicit formula for this polynomial, analogous to the formula of Khovanskii-Pukhlikov for the Ehrhart polynomial. These counting polynomials satisfy a lacunarity principle, the vanishing of alternate coefficients, quite unlike the Ehrhart polynomial. We show that formal geometric quantization of singular Calabi Yau hypersurfaces in smooth toric varieties gives this polynomial, in analogy with the relation of the Khovanskii-Pukhlikov formula to the geometric quantization of toric varieties. The Atiyah-Singer theorem for the index of the Dirac operator gives a moral argument for the lacunarity of the counting polynomial. We conjecture that similar formulas should hold for arbitrary simple integral polytope boundaries.