We determine every Jordan type partition that occurs as the Jordan block decomposition for the multiplication map by a linear form in a height two homogeneous complete intersection (CI) Artinian algebra $A$ over an algebraically closed field $\sf k$ of characteristic zero or large enough. We show that these CI Jordan type partitions are those satisfying specific numerical conditions; also, given the Hilbert function $H(A)$, they are completely determined by which higher Hessians of $A$ vanish at the point corresponding to the linear form. We also show new combinatorial results about such partitions, and in particular we give ways to construct them from a branch label or hook code, showing how branches are attached to a fundamental triangle to form the Ferrers graph.