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stat.ML updates on arXiv.org

Adaptive multi-fidelity optimization with fast learning rates Enhancing AI and Dynamical Subseasonal Forecasts with Probabilistic Bias Correction Sample Complexity Bounds for Stochastic Shortest Path with a Generative Model The Harder Path: Last Iterate Convergence for Uncoupled Learning in Zero-Sum Games with Bandit Feedback Stylistic-STORM (ST-STORM) : Perceiving the Semantic Nature of Appearance Collective Kernel EFT for Pre-activation ResNets PRIM-cipal components analysis One-Shot Generative Flows: Existence and Obstructions Structural interpretability in SVMs with truncated orthogonal polynomial kernels Amortized Optimal Transport from Sliced Potentials MinShap: A Modified Shapley Value Approach for Feature Selection Unsupervised feature selection using Bayesian Tucker decomposition Multi-User mmWave Beam and Rate Adaptation via Combinatorial Satisficing Bandits Best of both worlds: Stochastic & adversarial best-arm identification Scalable Model-Based Clustering with Sequential Monte Carlo Expert-Guided Class-Conditional Goodness-of-Fit Scores for Interpretable Classification with Informative Missingness: An Application to Seismic Monitoring Lightweight Geometric Adaptation for Training Physics-Informed Neural Networks Gating Enables Curvature: A Geometric Expressivity Gap in Attention Zeroth-Order Optimization at the Edge of Stability Differentially Private Conformal Prediction CLion: Efficient Cautious Lion Optimizer with Enhanced Generalization Generative Augmented Inference Improving Machine Learning Performance with Synthetic Augmentation PAC-MCTS: Bias-Aware Pruning for Robust LLM-Guided Search and Planning Path-Sampled Integrated Gradients Heat and Matérn Kernels on Matchings Doubly Outlier-Robust Online Infinite Hidden Markov Model Momentum Further Constrains Sharpness at the Edge of Stochastic Stability Multistage Conditional Compositional Optimization BOAT: Navigating the Sea of In Silico Predictors for Antibody Design via Multi-Objective Bayesian Optimization
Treatment response as a latent variable
Christopher Tosh, Boyuan Zhang, Wesley Tansey · 2025-02-13 · via stat.ML updates on arXiv.org

Scientists often need to analyze the samples in a study that responded to treatment in order to refine their hypotheses and find potential causal drivers of response. Natural variation in outcomes makes teasing apart responders from non-responders a statistical inference problem. To handle latent responses, we introduce the causal two-groups (C2G) model, a causal extension of the classical two-groups model. The C2G model posits that treated samples may or may not experience an effect, according to some prior probability. We propose two empirical Bayes procedures for the causal two-groups model, one under semi-parametric conditions and another under fully nonparametric conditions. The semi-parametric model assumes additive treatment effects and is identifiable from observed data. The nonparametric model is unidentifiable, but we show it can still be used to test for response in each treated sample. We show empirically and theoretically that both methods for selecting responders control the false discovery rate at the target level with near-optimal power. We also propose two novel estimands of interest and provide a strategy for deriving estimand intervals in the unidentifiable nonparametric model. On a cancer immunotherapy dataset, the nonparametric C2G model recovers clinically-validated predictive biomarkers of both positive and negative outcomes. Code is available at https://github.com/tansey-lab/causal2groups.