Deep learning is the method of choice for trajectory prediction for autonomous vehicles. Unfortunately, its data-hungry nature implicitly requires the availability of sufficiently rich and high-quality centralized datasets, which easily leads to privacy leakage. Besides, uncertainty-awareness becomes increasingly important for safety-crucial cyber physical systems whose prediction module heavily relies on machine learning tools. In this paper, we relax the data collection requirement and enhance uncertainty-awareness by using Federated Learning on Connected Autonomous Vehicles with an uncertainty-aware global objective. We name our algorithm as FLTP. We further introduce ALFLTP which boosts FLTP via using active learning techniques in adaptatively selecting participating clients. We consider both negative log-likelihood (NLL) and aleatoric uncertainty (AU) as client selection metrics. Experiments on Argoverse dataset show that FLTP significantly outperforms the model trained on local data. In addition, ALFLTP-AU converges faster in training regression loss and performs better in terms of NLL, minADE and MR than FLTP in most rounds, and has more stable round-wise performance than ALFLTP-NLL.