High-throughput Pairwise Alignment with the Wavefront Alg...
Safaa Diab, Amir Nassereldine, Mohammed Alser, Juan Gómez Luna, ·2022-04-05·via cs.DC updates on arXiv.org
We show that the wavefront algorithm can achieve higher pairwise read alignment throughput on a UPMEM PIM system than on a server-grade multi-threaded CPU system.