Flash memory is widely used as the secondary storage in lightweight computing devices due to its outstanding advantages over magnetic disks. Flash memory has many access characteristics different from those of magnetic disks, and how to take advantage of them is becoming an important research issue. There are two existing approaches to storing data into flash memory: page-based and log-based. The former has good performance for read operations, but poor performance for write operations. In contrast, the latter has good performance for write operations when updates are light, but poor performance for read operations. In this paper, we propose a new method of storing data, called page-differential logging, for flash-based storage systems that solves the drawbacks of the two methods. The primary characteristics of our method are: (1) writing only the difference (which we define as the page-differential) between the original page in flash memory and the up-to-date page in memory; (2) computing and writing the page-differential only once at the time the page needs to be reflected into flash memory. The former contrasts with existing page-based methods that write the whole page including both changed and unchanged parts of data or from log-based ones that keep track of the history of all the changes in a page. Our method allows existing disk-based DBMSs to be reused as flash-based DBMSs just by modifying the flash memory driver, i.e., it is DBMS-independent. Experimental results show that the proposed method improves the I/O performance by 1.2 ~ 6.1 times over existing methods for the TPC-C data of approximately 1 Gbytes.