We consider the problem of securing a given control loop implementation of a cyber-physical system (CPS) in the presence of Man-in-the-Middle attacks on data exchange between plant and controller over a compromised network. To this end, there exist various detection schemes that provide mathematical guarantees against such attacks for the theoretical control model. However, such guarantees may not hold for the actual control software implementation. In this article, we propose a formal approach towards synthesizing attack detectors with varying thresholds which can prevent performance degrading stealthy attacks while minimizing false alarms.