We develop a uniform skew Murnaghan--Nakayama theory for graded Hopf dual pairs equipped with a nondegenerate Hopf pairing. Using the completed Cauchy element, its grouplike factorization, and the resulting partial contraction operators, we establish a general skew Cauchy identity together with an abstract skew Murnaghan--Nakayama rule. Specializing this framework recovers and extends the classical skew Murnaghan--Nakayama rule for symmetric functions, and yields new skew Murnaghan--Nakayama formulas in several settings, including the dual pairs $(\mathrm{NSym}, \mathrm{QSym}) $ and $(Λ^{(k)}, Λ_{(k)}) $ arising in $k$-Schur theory, as well as the type $C$ affine Grassmannian context. As applications, we obtain generating functions for irreducible characters of Ariki--Koike algebras, including their type $A$ and type $B$ specializations, as well as Hecke--Clifford algebras and $\mathfrak q$-rook monoid algebras. We also give ribbon-tableau expansions for skew $(q,t)$-Kostka polynomials and for the entries of the inverse transition matrix, thereby answering a question of Carbonara (1998). Finally, by specializing the auxiliary alphabet $Y$ to sums of powers of primitive roots of unity, we derive a skew plethystic Murnaghan--Nakayama formula together with a Schur expansion for skew modular Schur functions; as a further consequence, we confirm Walker's conjecture (1994) by showing that if the transition from the modular Schur functions to the Schur basis is trivial in the row indexed by $λ$, then $λ$ must be a $k$-core.