惯性聚合 高效追踪和阅读你感兴趣的博客、新闻、科技资讯
阅读原文 在惯性聚合中打开

推荐订阅源

酷 壳 – CoolShell
酷 壳 – CoolShell
D
Docker
Microsoft Security Blog
Microsoft Security Blog
Google DeepMind News
Google DeepMind News
M
MIT News - Artificial intelligence
P
Proofpoint News Feed
Engineering at Meta
Engineering at Meta
Y
Y Combinator Blog
Vercel News
Vercel News
F
Fortinet All Blogs
B
Blog
Recent Announcements
Recent Announcements
A
About on SuperTechFans
GbyAI
GbyAI
T
The Blog of Author Tim Ferriss
钛媒体:引领未来商业与生活新知
钛媒体:引领未来商业与生活新知
博客园 - Franky
MongoDB | Blog
MongoDB | Blog
Stack Overflow Blog
Stack Overflow Blog
B
Blog RSS Feed
C
Check Point Blog
Cyber Security Advisories - MS-ISAC
Cyber Security Advisories - MS-ISAC
V
Visual Studio Blog
月光博客
月光博客

stat updates on arXiv.org

A Refined Generalization Analysis for Extreme Multi-class Supervised Contrastive Representation Learning Ensemble Distributionally Robust Bayesian Optimisation The Proxy Presumption: From Semantic Embeddings to Valid Social Measures Modulated learning for private and distributed regression with just a single sample per client device Query-efficient model evaluation using cached responses Functional-prior-based approaches to Bayesian PDE-constrained inversion using physics-informed neural networks Optimal Experiments for Partial Causal Effect Identification Order-Agnostic Autoregressive Modelling with Missing Data Grokking or Glitching? How Low-Precision Drives Slingshot Loss Spikes Tuning Derivatives for Causal Fairness in Machine Learning Spherical Flows for Sampling Categorical Data Bayesian Rain Field Reconstruction using Commercial Microwave Links and Diffusion Model Priors GRALIS: A Unified Canonical Framework for Linear Attribution Methods via Riesz Representation Sharp Capacity Thresholds in Linear Associative Memory: From Winner-Take-All to Listwise Retrieval Unified Framework of Distributional Regret in Multi-Armed Bandits and Reinforcement Learning Jacobian-Velocity Bounds for Deployment Risk Under Covariate Drift Self-Attention as Transport: Limits of Symmetric Spectral Diagnostics Perturbation is All You Need for Extrapolating Language Models Adapt or Forget: Provable Tradeoffs Between Adam and SGD in Nonstationary Optimization Realizable Bayes-Consistency for General Metric Losses Graph Convolutional Support Vector Regression for Robust Spatiotemporal Forecasting of Urban Air Pollution Segmenting Human-LLM Co-authored Text via Change Point Detection Stochastic Schrödinger Diffusion Models for Pure-State Ensemble Generation Understanding Self-Supervised Learning via Latent Distribution Matching The Geometric Mechanics of Contrastive Representation Learning: Alignment Potentials, Entropic Dispersion, and Cross-modal Divergence Imbalanced Classification under Capacity Constraints On the Spectral Structure and Objective Equivalence of Orthogonal Multilabel Fisher Discriminants Partially Observed Structural Causal Models First-Order Efficiency for Probabilistic Value Estimation via A Statistical Viewpoint Robust and Fast Training via Per-Sample Clipping
HR-VILAGE-3K3M: A Human Respiratory Viral Immunization Lo...
[Submitted on 19 May 2025 (v1), last revised 31 May 2026 (this v · 2026-06-02 · via stat updates on arXiv.org

View PDF HTML (experimental)

Abstract:Respiratory viral infections pose a global health burden, yet the cellular immune mechanisms underlying protection and pathology remain unclear. Natural infection cohorts often lack pre-exposure baselines and time-controlled sampling, whereas inoculation and vaccination trials generate well-structured longitudinal transcriptomic data. However, these datasets are scattered across repositories and processed inconsistently, hindering integrative and AI-driven analyses. To address these challenges, we developed the Human Respiratory Viral Immunization LongitudinAl Gene Expression (HR-VILAGE-3K3M) repository: an AI-ready resource integrating bulk and single-cell transcriptomic profiles from 3,178 subjects across 66 studies. The dataset spans vaccination, inoculation, and mixed exposures, with samples from blood and nasal swabs collected from public repositories including GEO, ImmPort, and ArrayExpress. We curated and harmonized subject-level metadata, standardized outcome measures, and applied unified preprocessing with rigorous quality control. We further provide benchmark analyses illustrating its utility. This resource supports discovery of biomarkers, immune mechanisms, and methodological development. As one of the largest longitudinal transcriptomic resources for human respiratory viral immunization, HR-VILAGE-3K3M enables reproducible and scalable analyses to accelerate vaccine and antiviral research.

Submission history

From: Xuejun Sun [view email]
[v1] Mon, 19 May 2025 19:37:49 UTC (27,622 KB)
[v2] Sun, 31 May 2026 06:33:45 UTC (4,412 KB)