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Towards end-to-end LLM-based censoring-aware survival analysis
Yishu Wei, H · 2026-05-26 · via cs.AI updates on arXiv.org

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Abstract:Objective: Survival analysis is central to medical prediction, yet large language models (LLMs) are rarely used as end-to-end survival models because censoring prevents straightforward supervised fine-tuning. Here we present LLMSurvival, a framework that enables censoring-aware survival analysis with unmodified LLMs operating directly on tabular clinical data.
Materials and Methods: LLMSurvival reformulates time-to-event prediction as pairwise ranking among comparable subjects, and derives test-time risk by aggregating comparisons against anchor individuals from the training cohort.
Results: Across two clinical tasks (ICU mortality prediction in MIMIC-IV and fragility fracture prediction in a NewYork-Presbyterian/Weill Cornell Medicine cohort), LLMSurvival improves overall concordance over Cox proportional hazards modeling by 3.1% for ICU mortality and 0.5% for fracture risk, 2.1% on average for ICU mortality and 2.8% for fracture risk over three established deep learning survival models.
Discussion: The results show that survival modeling with censoring can be made compatible with LLM fine-tuning through comparison-based reformulation. The framework demonstrates high portability and superior performance over expert curated scores like SAPS-II and FRAX scores across diverse clinical context. Furthermore, the framework supports local deployment, as compact, publicly available base models provide sufficient performance.
Conclusion: The LLMSurvival framework serves as a proof of concept for an integrated, censoring-conscious approach to survival analysis via LLMs.
Subjects: Artificial Intelligence (cs.AI)
Cite as: arXiv:2605.25399 [cs.AI]
  (or arXiv:2605.25399v1 [cs.AI] for this version)
  https://doi.org/10.48550/arXiv.2605.25399

arXiv-issued DOI via DataCite (pending registration)

Submission history

From: Yishu Wei [view email]
[v1] Mon, 25 May 2026 03:45:42 UTC (601 KB)